Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.27□□□□□ -0.13
CD74P04233 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
CD74P04233 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.27□□□□□ -0.13
CD74P04233 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
CD74P04233 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CD74P04233 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.26□□□□□ -0.13
CD74P04233 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CD74P04233 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 AL021920.2-201ENST00000624828 1351 ntBASIC14.26□□□□□ -0.13
CD74P04233 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.26□□□□□ -0.13
CD74P04233 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.26□□□□□ -0.13
CD74P04233 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CD74P04233 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.26□□□□□ -0.13
CD74P04233 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.26□□□□□ -0.13
CD74P04233 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CD74P04233 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 AL138966.2-201ENST00000621997 464 ntBASIC14.26□□□□□ -0.13
CD74P04233 AC073912.3-201ENST00000624414 853 ntBASIC14.26□□□□□ -0.13
CD74P04233 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.26□□□□□ -0.13
CD74P04233 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.26□□□□□ -0.13
CD74P04233 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.26□□□□□ -0.13
CD74P04233 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CD74P04233 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CD74P04233 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 AC010491.1-201ENST00000563101 2797 ntBASIC14.25□□□□□ -0.13
CD74P04233 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 AC144831.1-201ENST00000573312 2656 ntBASIC14.25□□□□□ -0.13
CD74P04233 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 FAM220CP-201ENST00000395253 831 ntBASIC14.25□□□□□ -0.13
CD74P04233 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 SPDYE15P-201ENST00000424157 909 ntBASIC14.25□□□□□ -0.13
CD74P04233 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.25□□□□□ -0.13
CD74P04233 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CD74P04233 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.25□□□□□ -0.13
CD74P04233 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.25□□□□□ -0.13
CD74P04233 AC005332.3-201ENST00000589904 676 ntBASIC14.25□□□□□ -0.13
CD74P04233 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.25□□□□□ -0.13
CD74P04233 AL390719.2-201ENST00000606993 987 ntBASIC14.25□□□□□ -0.13
CD74P04233 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 AL023973.1-201ENST00000624619 620 ntBASIC14.25□□□□□ -0.13
CD74P04233 GGT3P-204ENST00000453783 1664 ntBASIC14.25□□□□□ -0.13
CD74P04233 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CD74P04233 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.25□□□□□ -0.13
CD74P04233 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CD74P04233 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 GGT4P-201ENST00000623672 1708 ntBASIC14.24□□□□□ -0.13
CD74P04233 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 PKD1P5-201ENST00000532415 10291 ntBASIC14.24□□□□□ -0.13
CD74P04233 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.24□□□□□ -0.13
CD74P04233 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CD74P04233 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.24□□□□□ -0.13
CD74P04233 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms