Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCA5LO95447 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LCA5LO95447 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCA5LO95447 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LCA5LO95447 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LCA5LO95447 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
LCA5LO95447 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
LCA5LO95447 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.97■□□□□ 0.47
LCA5LO95447 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LCA5LO95447 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.97■□□□□ 0.47
LCA5LO95447 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.97■□□□□ 0.47
LCA5LO95447 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.97■□□□□ 0.47
LCA5LO95447 PAWRP1-201ENST00000451083 565 ntBASIC17.97■□□□□ 0.47
LCA5LO95447 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.97■□□□□ 0.47
LCA5LO95447 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
LCA5LO95447 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.97■□□□□ 0.47
LCA5LO95447 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 AP005117.1-201ENST00000584346 1413 ntBASIC17.97■□□□□ 0.47
LCA5LO95447 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LCA5LO95447 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LCA5LO95447 AL031731.1-201ENST00000642131 2094 ntBASIC17.96■□□□□ 0.47
LCA5LO95447 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
LCA5LO95447 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.96■□□□□ 0.47
LCA5LO95447 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 AC012615.1-201ENST00000565797 1299 ntBASIC17.96■□□□□ 0.47
LCA5LO95447 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LCA5LO95447 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.96■□□□□ 0.47
LCA5LO95447 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LCA5LO95447 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
LCA5LO95447 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
LCA5LO95447 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.96■□□□□ 0.46
LCA5LO95447 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
LCA5LO95447 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.95■□□□□ 0.46
LCA5LO95447 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LCA5LO95447 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LCA5LO95447 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 AC132872.4-202ENST00000622924 2756 ntBASIC17.95■□□□□ 0.46
LCA5LO95447 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.95■□□□□ 0.46
LCA5LO95447 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
LCA5LO95447 PCED1CP-201ENST00000419887 785 ntBASIC17.95■□□□□ 0.46
LCA5LO95447 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.95■□□□□ 0.46
LCA5LO95447 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.95■□□□□ 0.46
LCA5LO95447 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.95■□□□□ 0.46
LCA5LO95447 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.95■□□□□ 0.46
LCA5LO95447 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
LCA5LO95447 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.95■□□□□ 0.46
LCA5LO95447 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
LCA5LO95447 NPAP1P7-201ENST00000613027 823 ntBASIC17.95■□□□□ 0.46
LCA5LO95447 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LCA5LO95447 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms