Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.02■□□□□ 0.32
GPC4O75487 EMBP1-201ENST00000458200 901 ntBASIC17.02■□□□□ 0.32
GPC4O75487 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.02■□□□□ 0.32
GPC4O75487 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC4O75487 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.02■□□□□ 0.32
GPC4O75487 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC4O75487 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.02■□□□□ 0.32
GPC4O75487 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.02■□□□□ 0.32
GPC4O75487 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
GPC4O75487 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.02■□□□□ 0.31
GPC4O75487 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
GPC4O75487 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
GPC4O75487 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
GPC4O75487 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.02■□□□□ 0.31
GPC4O75487 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.01■□□□□ 0.31
GPC4O75487 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
GPC4O75487 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GPC4O75487 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.01■□□□□ 0.31
GPC4O75487 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 BX005266.1-201ENST00000473402 457 ntBASIC17.01■□□□□ 0.31
GPC4O75487 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.01■□□□□ 0.31
GPC4O75487 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 SART3-203ENST00000546611 1184 ntBASIC17.01■□□□□ 0.31
GPC4O75487 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.01■□□□□ 0.31
GPC4O75487 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.01■□□□□ 0.31
GPC4O75487 AL022326.1-202ENST00000641533 845 ntBASIC17.01■□□□□ 0.31
GPC4O75487 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
GPC4O75487 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.01■□□□□ 0.31
GPC4O75487 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
GPC4O75487 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.01■□□□□ 0.31
GPC4O75487 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.01■□□□□ 0.31
GPC4O75487 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
GPC4O75487 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
GPC4O75487 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
GPC4O75487 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17■□□□□ 0.31
GPC4O75487 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 PCDHB19P-201ENST00000570871 2371 ntBASIC17■□□□□ 0.31
GPC4O75487 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
GPC4O75487 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17■□□□□ 0.31
GPC4O75487 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 ACTG1P4-201ENST00000425123 1122 ntBASIC17■□□□□ 0.31
GPC4O75487 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GPC4O75487 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
GPC4O75487 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
GPC4O75487 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
GPC4O75487 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17■□□□□ 0.31
GPC4O75487 RN7SL510P-201ENST00000581311 263 ntBASIC17■□□□□ 0.31
GPC4O75487 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17■□□□□ 0.31
GPC4O75487 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17■□□□□ 0.31
GPC4O75487 AL691432.3-201ENST00000621860 400 ntBASIC17■□□□□ 0.31
GPC4O75487 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17■□□□□ 0.31
GPC4O75487 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17■□□□□ 0.31
GPC4O75487 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
GPC4O75487 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17■□□□□ 0.31
GPC4O75487 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17■□□□□ 0.31
GPC4O75487 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17■□□□□ 0.31
GPC4O75487 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
GPC4O75487 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
GPC4O75487 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
GPC4O75487 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.99■□□□□ 0.31
GPC4O75487 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms