Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PMPCBO75439 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PMPCBO75439 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
PMPCBO75439 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PMPCBO75439 AC092910.1-201ENST00000482027 1129 ntBASIC17.2■□□□□ 0.34
PMPCBO75439 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.2■□□□□ 0.34
PMPCBO75439 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.2■□□□□ 0.34
PMPCBO75439 AL121894.2-201ENST00000602977 491 ntBASIC17.2■□□□□ 0.34
PMPCBO75439 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PMPCBO75439 AF228730.7-201ENST00000641842 219 ntBASIC17.2■□□□□ 0.34
PMPCBO75439 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.2■□□□□ 0.34
PMPCBO75439 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.2■□□□□ 0.34
PMPCBO75439 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.2■□□□□ 0.34
PMPCBO75439 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PMPCBO75439 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PMPCBO75439 AL645728.1-201ENST00000366221 2101 ntBASIC17.2■□□□□ 0.34
PMPCBO75439 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PMPCBO75439 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMPCBO75439 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMPCBO75439 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.19■□□□□ 0.34
PMPCBO75439 MIR7706-201ENST00000613747 67 ntBASIC17.19■□□□□ 0.34
PMPCBO75439 AC005593.1-201ENST00000624894 515 ntBASIC17.19■□□□□ 0.34
PMPCBO75439 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PMPCBO75439 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.19■□□□□ 0.34
PMPCBO75439 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PMPCBO75439 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PMPCBO75439 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PMPCBO75439 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMPCBO75439 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMPCBO75439 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.18■□□□□ 0.34
PMPCBO75439 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
PMPCBO75439 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
PMPCBO75439 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.18■□□□□ 0.34
PMPCBO75439 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMPCBO75439 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
PMPCBO75439 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PMPCBO75439 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms