Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.26■□□□□ 0.03
PTP4A3O75365 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.26■□□□□ 0.03
PTP4A3O75365 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.26■□□□□ 0.03
PTP4A3O75365 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.26■□□□□ 0.03
PTP4A3O75365 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A3O75365 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A3O75365 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PTP4A3O75365 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.26■□□□□ 0.03
PTP4A3O75365 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PTP4A3O75365 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.26■□□□□ 0.03
PTP4A3O75365 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 AC079328.2-201ENST00000561241 3354 ntBASIC15.25■□□□□ 0.03
PTP4A3O75365 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.25■□□□□ 0.03
PTP4A3O75365 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
PTP4A3O75365 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PTP4A3O75365 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A3O75365 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.25■□□□□ 0.03
PTP4A3O75365 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 KRT18P35-201ENST00000510488 1269 ntBASIC15.25■□□□□ 0.03
PTP4A3O75365 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.25■□□□□ 0.03
PTP4A3O75365 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 AC138894.3-201ENST00000603787 634 ntBASIC15.25■□□□□ 0.03
PTP4A3O75365 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A3O75365 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A3O75365 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
PTP4A3O75365 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PTP4A3O75365 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
PTP4A3O75365 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PTP4A3O75365 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 TCAF2P1-201ENST00000291129 2421 ntBASIC15.24■□□□□ 0.03
PTP4A3O75365 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PTP4A3O75365 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 RBM17P3-201ENST00000417687 1192 ntBASIC15.24■□□□□ 0.03
PTP4A3O75365 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PTP4A3O75365 PAWRP1-201ENST00000451083 565 ntBASIC15.24■□□□□ 0.03
PTP4A3O75365 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.24■□□□□ 0.03
PTP4A3O75365 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.24■□□□□ 0.03
PTP4A3O75365 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms