Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CDH16O75309 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH16O75309 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH16O75309 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDH16O75309 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDH16O75309 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CDH16O75309 AC132938.5-201ENST00000624980 1813 ntBASIC17.14■□□□□ 0.34
CDH16O75309 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH16O75309 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH16O75309 KRT18P57-201ENST00000443599 1254 ntBASIC17.14■□□□□ 0.33
CDH16O75309 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CDH16O75309 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH16O75309 DUX4L17-201ENST00000557360 1267 ntBASIC17.14■□□□□ 0.33
CDH16O75309 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.14■□□□□ 0.33
CDH16O75309 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH16O75309 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH16O75309 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH16O75309 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH16O75309 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH16O75309 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 AC005052.1-201ENST00000625181 2492 ntBASIC17.13■□□□□ 0.33
CDH16O75309 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH16O75309 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 KLF4P1-201ENST00000412782 1185 ntBASIC17.13■□□□□ 0.33
CDH16O75309 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH16O75309 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 YBX1P2-201ENST00000489612 999 ntBASIC17.13■□□□□ 0.33
CDH16O75309 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 AC005336.2-201ENST00000593183 939 ntBASIC17.13■□□□□ 0.33
CDH16O75309 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH16O75309 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH16O75309 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH16O75309 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms