Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
LDB2O43679 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 AC129492.6-201ENST00000611383 1305 ntBASIC16.91■□□□□ 0.3
LDB2O43679 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LDB2O43679 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LDB2O43679 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 SNX33P1-201ENST00000592116 1762 ntBASIC16.9■□□□□ 0.3
LDB2O43679 AL118508.1-201ENST00000613502 2345 ntBASIC16.9■□□□□ 0.3
LDB2O43679 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LDB2O43679 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 MRPL20P1-201ENST00000400819 433 ntBASIC16.9■□□□□ 0.3
LDB2O43679 PMS2P1-201ENST00000431037 1228 ntBASIC16.9■□□□□ 0.3
LDB2O43679 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.9■□□□□ 0.3
LDB2O43679 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.9■□□□□ 0.3
LDB2O43679 AC091167.2-201ENST00000579581 588 ntBASIC16.9■□□□□ 0.3
LDB2O43679 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.9■□□□□ 0.3
LDB2O43679 AL139011.1-202ENST00000642063 584 ntBASIC16.9■□□□□ 0.3
LDB2O43679 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.9■□□□□ 0.3
LDB2O43679 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
LDB2O43679 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LDB2O43679 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
LDB2O43679 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB2O43679 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
LDB2O43679 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LDB2O43679 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.89■□□□□ 0.29
LDB2O43679 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
LDB2O43679 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.89■□□□□ 0.29
LDB2O43679 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.89■□□□□ 0.29
LDB2O43679 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 AC093909.1-201ENST00000504731 1122 ntBASIC16.89■□□□□ 0.29
LDB2O43679 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 UNC93B6-202ENST00000528242 690 ntBASIC16.89■□□□□ 0.29
LDB2O43679 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.89■□□□□ 0.29
LDB2O43679 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 AC124067.4-201ENST00000519691 2379 ntBASIC16.89■□□□□ 0.29
LDB2O43679 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LDB2O43679 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
LDB2O43679 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.89■□□□□ 0.29
LDB2O43679 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LDB2O43679 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
LDB2O43679 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LDB2O43679 AC131009.4-201ENST00000624048 1740 ntBASIC16.88■□□□□ 0.29
LDB2O43679 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms