Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A1O14983 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A1O14983 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A1O14983 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP2A1O14983 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP2A1O14983 RBPMS2P1-201ENST00000437762 623 ntBASIC19.3■□□□□ 0.68
ATP2A1O14983 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP2A1O14983 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.3■□□□□ 0.68
ATP2A1O14983 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATP2A1O14983 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A1O14983 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ATP2A1O14983 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATP2A1O14983 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ATP2A1O14983 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A1O14983 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A1O14983 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A1O14983 SPDYE14P-201ENST00000442619 822 ntBASIC19.29■□□□□ 0.68
ATP2A1O14983 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.29■□□□□ 0.68
ATP2A1O14983 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.29■□□□□ 0.68
ATP2A1O14983 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATP2A1O14983 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.29■□□□□ 0.68
ATP2A1O14983 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ATP2A1O14983 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
ATP2A1O14983 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A1O14983 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A1O14983 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A1O14983 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2A1O14983 AC124947.2-201ENST00000547118 1133 ntBASIC19.28■□□□□ 0.68
ATP2A1O14983 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2A1O14983 DUX4L27-201ENST00000554796 1261 ntBASIC19.28■□□□□ 0.68
ATP2A1O14983 AC026150.2-201ENST00000564693 1156 ntBASIC19.28■□□□□ 0.68
ATP2A1O14983 AP000842.3-202ENST00000569238 1080 ntBASIC19.28■□□□□ 0.68
ATP2A1O14983 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2A1O14983 CYP2A7P1-201ENST00000595391 815 ntBASIC19.28■□□□□ 0.68
ATP2A1O14983 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP2A1O14983 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ATP2A1O14983 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP2A1O14983 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP2A1O14983 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2A1O14983 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2A1O14983 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ATP2A1O14983 TUBB3P1-201ENST00000405796 1332 ntBASIC19.27■□□□□ 0.68
ATP2A1O14983 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ATP2A1O14983 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ATP2A1O14983 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A1O14983 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ATP2A1O14983 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms