Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.96□□□□□ -0.17
A0A1W2PRF3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.96□□□□□ -0.17
A0A1W2PRF3 KRT18P2-201ENST00000447938 1258 ntBASIC13.96□□□□□ -0.17
A0A1W2PRF3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
A0A1W2PRF3 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.96□□□□□ -0.17
A0A1W2PRF3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
A0A1W2PRF3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.96□□□□□ -0.17
A0A1W2PRF3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.96□□□□□ -0.17
A0A1W2PRF3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
A0A1W2PRF3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
A0A1W2PRF3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
A0A1W2PRF3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
A0A1W2PRF3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.96□□□□□ -0.18
A0A1W2PRF3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
A0A1W2PRF3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
A0A1W2PRF3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.96□□□□□ -0.18
A0A1W2PRF3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.96□□□□□ -0.18
A0A1W2PRF3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.96□□□□□ -0.18
A0A1W2PRF3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.96□□□□□ -0.18
A0A1W2PRF3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 AC093525.9-201ENST00000624961 1746 ntBASIC13.95□□□□□ -0.18
A0A1W2PRF3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 VN2R19P-201ENST00000442399 1052 ntBASIC13.95□□□□□ -0.18
A0A1W2PRF3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 FAM197Y3-203ENST00000618346 717 ntBASIC13.95□□□□□ -0.18
A0A1W2PRF3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.95□□□□□ -0.18
A0A1W2PRF3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
A0A1W2PRF3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 AL591424.1-201ENST00000442569 1213 ntBASIC13.94□□□□□ -0.18
A0A1W2PRF3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 GGTLC5P-201ENST00000617623 998 ntBASIC13.94□□□□□ -0.18
A0A1W2PRF3 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 AC023511.2-201ENST00000618803 211 ntBASIC13.94□□□□□ -0.18
A0A1W2PRF3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
A0A1W2PRF3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
A0A1W2PRF3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms