Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 NKILA-202ENST00000614771 2598 ntBASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 CRYGEP-201ENST00000412192 528 ntBASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 AL139011.1-202ENST00000642063 584 ntBASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC099398.1-201ENST00000567919 2776 ntBASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC196A0A1B0GTZ2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC009053.2-201ENST00000563701 2365 ntBASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 AL590627.1-203ENST00000421194 1026 ntBASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 BX640515.1-201ENST00000617215 977 ntBASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC078925.2-201ENST00000624013 1973 ntBASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CCDC196A0A1B0GTZ2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC131009.4-201ENST00000624048 1740 ntBASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 TNRC18P3-201ENST00000441896 2691 ntBASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 FAM185BP-201ENST00000443595 716 ntBASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 IL9RP2-201ENST00000423948 1312 ntBASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 AC011676.5-201ENST00000624864 2660 ntBASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.65■□□□□ 0.74
CCDC196A0A1B0GTZ2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC196A0A1B0GTZ2 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC196A0A1B0GTZ2 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CCDC196A0A1B0GTZ2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC196A0A1B0GTZ2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC196A0A1B0GTZ2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC196A0A1B0GTZ2 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms