Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 AC004461.1-201ENST00000412461 403 ntBASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 AC025678.2-201ENST00000562061 970 ntBASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSX2IPQ9Y2D8 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 MIR770-201ENST00000390219 98 ntBASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 AC011467.4-201ENST00000594891 528 ntBASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.22■□□□□ 0.51
SSX2IPQ9Y2D8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 HLA-J-203ENST00000494367 1087 ntBASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SLC25A6P2-201ENST00000497974 877 ntBASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 AC106028.4-201ENST00000614509 607 ntBASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 AC006116.8-202ENST00000587620 1550 ntBASIC18.21■□□□□ 0.51
SSX2IPQ9Y2D8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.2■□□□□ 0.5
SSX2IPQ9Y2D8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms