Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP25Q9UHP3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP25Q9UHP3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.48■□□□□ 0.71
USP25Q9UHP3 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.48■□□□□ 0.71
USP25Q9UHP3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP25Q9UHP3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
USP25Q9UHP3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP25Q9UHP3 TSPY26P-202ENST00000565928 3884 ntBASIC19.48■□□□□ 0.71
USP25Q9UHP3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
USP25Q9UHP3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 AP002383.4-201ENST00000442518 975 ntBASIC19.47■□□□□ 0.71
USP25Q9UHP3 FAM210CP-201ENST00000445714 574 ntBASIC19.47■□□□□ 0.71
USP25Q9UHP3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.47■□□□□ 0.71
USP25Q9UHP3 INTS4P1-201ENST00000438455 1935 ntBASIC19.47■□□□□ 0.71
USP25Q9UHP3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP25Q9UHP3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 KRT17P6-201ENST00000453795 1220 ntBASIC19.46■□□□□ 0.71
USP25Q9UHP3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 AC073592.5-201ENST00000624854 528 ntBASIC19.46■□□□□ 0.71
USP25Q9UHP3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 AL356309.3-201ENST00000624132 1934 ntBASIC19.46■□□□□ 0.71
USP25Q9UHP3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
USP25Q9UHP3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP25Q9UHP3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 IER3-202ENST00000376377 1350 ntBASIC19.45■□□□□ 0.7
USP25Q9UHP3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP25Q9UHP3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.45■□□□□ 0.7
USP25Q9UHP3 MINOS1P3-201ENST00000457048 203 ntBASIC19.45■□□□□ 0.7
USP25Q9UHP3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms