Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AC133963.1-201ENST00000504166 1679 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AC006504.4-201ENST00000592118 1568 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ATP6V0CP3-201ENST00000417255 467 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AC108751.1-201ENST00000490852 363 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 RPS15P9-201ENST00000494093 319 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 IGHV3-65-201ENST00000523210 341 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 GGTLC5P-201ENST00000617623 998 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 FLJ38576-201ENST00000623820 2459 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 AC068418.2-201ENST00000577309 3703 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 CD276-203ENST00000537340 2439 ntTSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 PMS2P7-201ENST00000506558 1336 ntBASIC11.85□□□□□ -0.51
UPK3BQ9BT76 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 NME9-203ENST00000383180 2133 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 MED15P5-201ENST00000423150 992 ntBASIC11.84□□□□□ -0.51
UPK3BQ9BT76 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 PRSS29P-201ENST00000440800 595 ntBASIC11.84□□□□□ -0.51
UPK3BQ9BT76 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 TK1-204ENST00000590430 683 ntTSL 3 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 TERC-201ENST00000602385 541 ntBASIC11.84□□□□□ -0.51
UPK3BQ9BT76 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC11.84□□□□□ -0.51
UPK3BQ9BT76 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms