Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VGLL1Q99990 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
VGLL1Q99990 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.9□□□□□ -0.34
VGLL1Q99990 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC12.9□□□□□ -0.34
VGLL1Q99990 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 AC104076.2-201ENST00000448912 469 ntBASIC12.9□□□□□ -0.34
VGLL1Q99990 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.9□□□□□ -0.34
VGLL1Q99990 AL671277.2-201ENST00000458060 996 ntBASIC12.9□□□□□ -0.34
VGLL1Q99990 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.9□□□□□ -0.34
VGLL1Q99990 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
VGLL1Q99990 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC12.9□□□□□ -0.34
VGLL1Q99990 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
VGLL1Q99990 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.9□□□□□ -0.34
VGLL1Q99990 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
VGLL1Q99990 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
VGLL1Q99990 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VGLL1Q99990 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
VGLL1Q99990 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.89□□□□□ -0.35
VGLL1Q99990 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
VGLL1Q99990 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.89□□□□□ -0.35
VGLL1Q99990 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.89□□□□□ -0.35
VGLL1Q99990 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
VGLL1Q99990 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 AC063952.2-201ENST00000498792 1227 ntBASIC12.89□□□□□ -0.35
VGLL1Q99990 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC12.89□□□□□ -0.35
VGLL1Q99990 AC090616.6-201ENST00000582640 721 ntBASIC12.89□□□□□ -0.35
VGLL1Q99990 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.89□□□□□ -0.35
VGLL1Q99990 RBM42-202ENST00000586618 771 ntTSL 3 BASIC12.89□□□□□ -0.35
VGLL1Q99990 NDUFV2-AS1-203ENST00000608008 779 ntBASIC12.89□□□□□ -0.35
VGLL1Q99990 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.89□□□□□ -0.35
VGLL1Q99990 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.89□□□□□ -0.35
VGLL1Q99990 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
VGLL1Q99990 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VGLL1Q99990 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms