Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 AP002982.1-201ENST00000492365 877 ntBASIC16■□□□□ 0.15
NR1H4Q96RI1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16■□□□□ 0.15
NR1H4Q96RI1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16■□□□□ 0.15
NR1H4Q96RI1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16■□□□□ 0.15
NR1H4Q96RI1 MIR3180-5-201ENST00000583743 153 ntBASIC16■□□□□ 0.15
NR1H4Q96RI1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16■□□□□ 0.15
NR1H4Q96RI1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16■□□□□ 0.15
NR1H4Q96RI1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16■□□□□ 0.15
NR1H4Q96RI1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16■□□□□ 0.15
NR1H4Q96RI1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16■□□□□ 0.15
NR1H4Q96RI1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H4Q96RI1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NR1H4Q96RI1 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16■□□□□ 0.15
NR1H4Q96RI1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 C1QBPP2-201ENST00000528754 825 ntBASIC15.99■□□□□ 0.15
NR1H4Q96RI1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AC005089.1-201ENST00000619486 2241 ntBASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 AL359258.3-201ENST00000622910 2331 ntBASIC15.99■□□□□ 0.15
NR1H4Q96RI1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
NR1H4Q96RI1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 AL445675.2-201ENST00000620291 557 ntBASIC15.98■□□□□ 0.15
NR1H4Q96RI1 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 AC007292.2-201ENST00000593524 1812 ntBASIC15.98■□□□□ 0.15
NR1H4Q96RI1 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H4Q96RI1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms