Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTCD2Q8WV60 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTCD2Q8WV60 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC084018.2-201ENST00000613093 2607 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 MIR574-201ENST00000385209 96 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC073621.1-201ENST00000392730 636 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 LAGE3P1-201ENST00000425356 484 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 KRT18P27-201ENST00000427733 1299 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC007688.1-201ENST00000475592 759 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 DUX4L17-201ENST00000557360 1267 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC117500.6-201ENST00000624871 588 ntBASIC17.2■□□□□ 0.34
PTCD2Q8WV60 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
PTCD2Q8WV60 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AL021920.2-201ENST00000624828 1351 ntBASIC17.19■□□□□ 0.34
PTCD2Q8WV60 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AC078925.2-201ENST00000624013 1973 ntBASIC17.19■□□□□ 0.34
PTCD2Q8WV60 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AC105339.3-201ENST00000560043 636 ntBASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AC104109.2-201ENST00000602919 1418 ntBASIC17.19■□□□□ 0.34
PTCD2Q8WV60 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AC006504.4-201ENST00000592118 1568 ntBASIC17.19■□□□□ 0.34
PTCD2Q8WV60 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTCD2Q8WV60 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 RPS2P28-201ENST00000314255 741 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ELK2BP-201ENST00000415014 1224 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 RNA5SP415-201ENST00000517246 115 ntBASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.18■□□□□ 0.34
PTCD2Q8WV60 AC106730.1-201ENST00000566722 1090 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms