Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RASGEF1AQ8N9B8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 LTB4R2-202ENST00000528054 3092 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 NFIC-211ENST00000641145 8399 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC105020.1-201ENST00000435356 2205 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC023274.1-201ENST00000418278 595 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC023141.13-201ENST00000604991 943 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AC025580.3-201ENST00000617932 1424 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AL513190.1-201ENST00000621254 727 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 AL353732.1-201ENST00000569618 1459 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 BCAR1-209ENST00000546196 1340 ntBASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RASGEF1AQ8N9B8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 AC091167.2-201ENST00000579581 588 ntBASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 AC007064.4-201ENST00000637740 555 ntBASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RASGEF1AQ8N9B8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
RASGEF1AQ8N9B8 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms