Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM50Q86XT4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 HLA-J-203ENST00000494367 1087 ntBASIC18.84■□□□□ 0.61
TRIM50Q86XT4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 LINC00628-201ENST00000628516 1289 ntBASIC18.84■□□□□ 0.61
TRIM50Q86XT4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM50Q86XT4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM50Q86XT4 AC005237.2-201ENST00000434368 219 ntBASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AL592309.1-201ENST00000443127 649 ntBASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AC069335.1-201ENST00000489972 472 ntBASIC18.83■□□□□ 0.6
TRIM50Q86XT4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 FAM86C2P-203ENST00000528684 1004 ntBASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AC093512.1-201ENST00000617969 520 ntBASIC18.83■□□□□ 0.6
TRIM50Q86XT4 AC009093.7-201ENST00000623853 1223 ntBASIC18.83■□□□□ 0.6
TRIM50Q86XT4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM50Q86XT4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 FAM58DP-201ENST00000428076 619 ntBASIC18.82■□□□□ 0.6
TRIM50Q86XT4 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 RN7SL589P-201ENST00000481268 310 ntBASIC18.82■□□□□ 0.6
TRIM50Q86XT4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM50Q86XT4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms