Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 HLA-L-209ENST00000420110 1011 ntBASIC14.14□□□□□ -0.15
ZNF546Q86UE3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 AC013268.4-201ENST00000637413 2228 ntBASIC14.14□□□□□ -0.15
ZNF546Q86UE3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.14□□□□□ -0.15
ZNF546Q86UE3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 AC090192.1-201ENST00000517740 490 ntBASIC14.13□□□□□ -0.15
ZNF546Q86UE3 AP002490.2-201ENST00000524791 560 ntBASIC14.13□□□□□ -0.15
ZNF546Q86UE3 KRT18P6-201ENST00000555540 1265 ntBASIC14.13□□□□□ -0.15
ZNF546Q86UE3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
ZNF546Q86UE3 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 AC007326.2-201ENST00000624224 7579 ntBASIC14.12□□□□□ -0.15
ZNF546Q86UE3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
ZNF546Q86UE3 FAM197Y1-201ENST00000421178 764 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms