Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 RNU1-129P-201ENST00000384064 167 ntBASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 U1.21-201ENST00000580816 167 ntBASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC62Q6P9F0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 FAM8A3P-201ENST00000427218 844 ntBASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 AC005498.2-205ENST00000593218 784 ntBASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 Z92544.3-201ENST00000624747 417 ntBASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCDC62Q6P9F0 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 MIR3909-201ENST00000579518 119 ntBASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 MPDU1-223ENST00000582151 728 ntBASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 AP001059.3-201ENST00000619053 235 ntBASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCDC62Q6P9F0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms