Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 AC092053.1-201ENST00000605787 1936 ntBASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 AC132938.2-201ENST00000579188 680 ntBASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 AL591163.1-201ENST00000641757 987 ntBASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CDC42BPAQ5VT25 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 KRT17P7-201ENST00000451704 1104 ntBASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 ACA64.2-201ENST00000459014 129 ntBASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 AC138969.3-201ENST00000546612 1459 ntBASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 AC138932.2-201ENST00000548268 1459 ntBASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 AC126755.4-201ENST00000549796 1459 ntBASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 AL391825.1-201ENST00000457671 1364 ntBASIC25.22■■□□□ 1.63
CDC42BPAQ5VT25 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 DFFBP1-201ENST00000433250 979 ntBASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 KRT8P39-201ENST00000396270 1433 ntBASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 KRT8P12-202ENST00000472924 1397 ntBASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 PC-204ENST00000524491 1714 ntTSL 2 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
CDC42BPAQ5VT25 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 POLE2-203ENST00000553805 496 ntTSL 2 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
CDC42BPAQ5VT25 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 RPS19-201ENST00000221975 500 ntTSL 3 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 MIR1909-201ENST00000411312 80 ntBASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 ARSEP1-201ENST00000420443 635 ntBASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 TMEM14DP-201ENST00000422205 345 ntBASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 AL008721.1-201ENST00000609964 604 ntBASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
CDC42BPAQ5VT25 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC25.19■■□□□ 1.62
CDC42BPAQ5VT25 VMO1-203ENST00000416307 712 ntTSL 2 BASIC25.19■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms