Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AC132938.5-201ENST00000624980 1813 ntBASIC17.13■□□□□ 0.33
LGSNQ5TDP6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AC005521.1-201ENST00000393351 872 ntBASIC17.13■□□□□ 0.33
LGSNQ5TDP6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AC012306.2-201ENST00000609350 630 ntBASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AD001527.2-201ENST00000622994 785 ntBASIC17.13■□□□□ 0.33
LGSNQ5TDP6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AL662844.4-201ENST00000606367 2838 ntBASIC17.13■□□□□ 0.33
LGSNQ5TDP6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 AC022188.1-201ENST00000620960 1664 ntBASIC17.13■□□□□ 0.33
LGSNQ5TDP6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
LGSNQ5TDP6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 AL162727.3-201ENST00000635661 2787 ntBASIC17.12■□□□□ 0.33
LGSNQ5TDP6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 LINC02199-201ENST00000506655 2702 ntBASIC17.12■□□□□ 0.33
LGSNQ5TDP6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 LINC01023-201ENST00000606054 436 ntBASIC17.12■□□□□ 0.33
LGSNQ5TDP6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.12■□□□□ 0.33
LGSNQ5TDP6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LGSNQ5TDP6 AC008741.2-201ENST00000612792 3115 ntBASIC17.12■□□□□ 0.33
LGSNQ5TDP6 PCDHA1-201ENST00000378133 2726 ntBASIC17.12■□□□□ 0.33
LGSNQ5TDP6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 AL139384.1-201ENST00000612143 3047 ntBASIC17.11■□□□□ 0.33
LGSNQ5TDP6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 SPDYE13P-201ENST00000445314 798 ntBASIC17.11■□□□□ 0.33
LGSNQ5TDP6 HLA-J-202ENST00000469281 1241 ntBASIC17.11■□□□□ 0.33
LGSNQ5TDP6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 AC073592.5-201ENST00000624854 528 ntBASIC17.11■□□□□ 0.33
LGSNQ5TDP6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 AC067930.6-201ENST00000623257 4947 ntBASIC17.11■□□□□ 0.33
LGSNQ5TDP6 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LGSNQ5TDP6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms