Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SGO1Q5FBB7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 PCDHB17P-201ENST00000539533 2393 ntBASIC16.52■□□□□ 0.24
SGO1Q5FBB7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 KRT16P4-201ENST00000453883 522 ntBASIC16.52■□□□□ 0.24
SGO1Q5FBB7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.52■□□□□ 0.24
SGO1Q5FBB7 AP001269.4-201ENST00000609611 512 ntBASIC16.52■□□□□ 0.24
SGO1Q5FBB7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SGO1Q5FBB7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 LINC00982-205ENST00000420957 435 ntBASIC16.51■□□□□ 0.23
SGO1Q5FBB7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SGO1Q5FBB7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 AC079776.2-201ENST00000641154 1609 ntBASIC16.5■□□□□ 0.23
SGO1Q5FBB7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 AP005117.1-201ENST00000584346 1413 ntBASIC16.5■□□□□ 0.23
SGO1Q5FBB7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SGO1Q5FBB7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SGO1Q5FBB7 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SGO1Q5FBB7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
SGO1Q5FBB7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SGO1Q5FBB7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SGO1Q5FBB7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms