Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H3F3AP84243 AC005915.1-201ENST00000624912 2018 ntBASIC15.15■□□□□ 0.02
H3F3AP84243 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H3F3AP84243 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
H3F3AP84243 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 AC104109.2-201ENST00000602919 1418 ntBASIC15.15■□□□□ 0.02
H3F3AP84243 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.15■□□□□ 0.02
H3F3AP84243 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
H3F3AP84243 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H3F3AP84243 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
H3F3AP84243 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.14■□□□□ 0.01
H3F3AP84243 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
H3F3AP84243 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 FAM185BP-201ENST00000443595 716 ntBASIC15.14■□□□□ 0.01
H3F3AP84243 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.14■□□□□ 0.01
H3F3AP84243 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.14■□□□□ 0.01
H3F3AP84243 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
H3F3AP84243 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.14■□□□□ 0.01
H3F3AP84243 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
H3F3AP84243 AD000864.1-201ENST00000624076 2295 ntBASIC15.14■□□□□ 0.01
H3F3AP84243 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.14■□□□□ 0.01
H3F3AP84243 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.14■□□□□ 0.01
H3F3AP84243 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
H3F3AP84243 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
H3F3AP84243 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3AP84243 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
H3F3AP84243 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
H3F3AP84243 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.13■□□□□ 0.01
H3F3AP84243 HCG4B-203ENST00000450128 991 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.13■□□□□ 0.01
H3F3AP84243 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3AP84243 AP002490.2-201ENST00000524791 560 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 SLC25A1P1-201ENST00000528351 927 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 AC106730.1-201ENST00000566722 1090 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 AC120114.3-201ENST00000611923 658 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.13■□□□□ 0.01
H3F3AP84243 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3AP84243 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.13■□□□□ 0.01
H3F3AP84243 LINC00895-201ENST00000629028 1637 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 AL645728.1-201ENST00000366221 2101 ntBASIC15.13■□□□□ 0.01
H3F3AP84243 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
H3F3AP84243 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H3F3AP84243 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
H3F3AP84243 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.12■□□□□ 0.01
H3F3AP84243 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
H3F3AP84243 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
H3F3AP84243 AC009053.2-201ENST00000563701 2365 ntBASIC15.12■□□□□ 0.01
H3F3AP84243 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms