Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.08■□□□□ 0.16
GABREP78334 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.08■□□□□ 0.16
GABREP78334 AC026471.1-201ENST00000564629 3026 ntBASIC16.08■□□□□ 0.16
GABREP78334 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
GABREP78334 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
GABREP78334 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.07■□□□□ 0.16
GABREP78334 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.07■□□□□ 0.16
GABREP78334 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.07■□□□□ 0.16
GABREP78334 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.07■□□□□ 0.16
GABREP78334 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.07■□□□□ 0.16
GABREP78334 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.07■□□□□ 0.16
GABREP78334 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GABREP78334 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.07■□□□□ 0.16
GABREP78334 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.07■□□□□ 0.16
GABREP78334 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.07■□□□□ 0.16
GABREP78334 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GABREP78334 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
GABREP78334 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
GABREP78334 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
GABREP78334 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.06■□□□□ 0.16
GABREP78334 AC241585.1-201ENST00000433527 519 ntBASIC16.06■□□□□ 0.16
GABREP78334 SERBP1P5-201ENST00000510079 1181 ntBASIC16.06■□□□□ 0.16
GABREP78334 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.06■□□□□ 0.16
GABREP78334 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.06■□□□□ 0.16
GABREP78334 AL008721.1-201ENST00000609964 604 ntBASIC16.06■□□□□ 0.16
GABREP78334 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABREP78334 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
GABREP78334 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.06■□□□□ 0.16
GABREP78334 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
GABREP78334 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
GABREP78334 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
GABREP78334 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.05■□□□□ 0.16
GABREP78334 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.05■□□□□ 0.16
GABREP78334 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GABREP78334 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.05■□□□□ 0.16
GABREP78334 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.05■□□□□ 0.16
GABREP78334 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.05■□□□□ 0.16
GABREP78334 AC092580.3-201ENST00000430932 139 ntBASIC16.05■□□□□ 0.16
GABREP78334 AC007274.1-201ENST00000439805 662 ntBASIC16.05■□□□□ 0.16
GABREP78334 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.05■□□□□ 0.16
GABREP78334 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABREP78334 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GABREP78334 AC008267.7-201ENST00000624570 1194 ntBASIC16.05■□□□□ 0.16
GABREP78334 AC008764.6-201ENST00000595909 2069 ntBASIC16.05■□□□□ 0.16
GABREP78334 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GABREP78334 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms