Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDH13P55290 SIGLEC16-201ENST00000599858 1437 ntBASIC16.62■□□□□ 0.25
CDH13P55290 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CDH13P55290 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDH13P55290 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH13P55290 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH13P55290 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH13P55290 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.61■□□□□ 0.25
CDH13P55290 DUX4L17-201ENST00000557360 1267 ntBASIC16.61■□□□□ 0.25
CDH13P55290 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.61■□□□□ 0.25
CDH13P55290 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CDH13P55290 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CDH13P55290 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CDH13P55290 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDH13P55290 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDH13P55290 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH13P55290 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 AC079776.2-201ENST00000641154 1609 ntBASIC16.6■□□□□ 0.25
CDH13P55290 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH13P55290 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH13P55290 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.6■□□□□ 0.25
CDH13P55290 ATP5G2P1-201ENST00000433580 426 ntBASIC16.6■□□□□ 0.25
CDH13P55290 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH13P55290 KRT18P35-201ENST00000510488 1269 ntBASIC16.6■□□□□ 0.25
CDH13P55290 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
CDH13P55290 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
CDH13P55290 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.6■□□□□ 0.25
CDH13P55290 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
CDH13P55290 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDH13P55290 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.59■□□□□ 0.25
CDH13P55290 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CDH13P55290 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDH13P55290 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDH13P55290 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms