Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
SLC1A1P43005 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SLC1A1P43005 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC1A1P43005 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC1A1P43005 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 PAWRP1-201ENST00000451083 565 ntBASIC17.73■□□□□ 0.43
SLC1A1P43005 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.73■□□□□ 0.43
SLC1A1P43005 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 AC139887.3-201ENST00000568585 713 ntBASIC17.73■□□□□ 0.43
SLC1A1P43005 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 MIR3652-201ENST00000579335 131 ntBASIC17.73■□□□□ 0.43
SLC1A1P43005 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 AL732292.2-201ENST00000609649 430 ntBASIC17.73■□□□□ 0.43
SLC1A1P43005 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SLC1A1P43005 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.73■□□□□ 0.43
SLC1A1P43005 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SLC1A1P43005 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC1A1P43005 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SLC1A1P43005 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.72■□□□□ 0.43
SLC1A1P43005 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SLC1A1P43005 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.72■□□□□ 0.43
SLC1A1P43005 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.72■□□□□ 0.43
SLC1A1P43005 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
SLC1A1P43005 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.72■□□□□ 0.43
SLC1A1P43005 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SLC1A1P43005 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC1A1P43005 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SLC1A1P43005 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SLC1A1P43005 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 KRT18P31-201ENST00000506277 1292 ntBASIC17.71■□□□□ 0.43
SLC1A1P43005 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.71■□□□□ 0.43
SLC1A1P43005 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SLC1A1P43005 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.71■□□□□ 0.43
SLC1A1P43005 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.71■□□□□ 0.43
SLC1A1P43005 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms