Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 NUS1P2-201ENST00000417358 873 ntBASIC16.05■□□□□ 0.16
CDKN2CP42773 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKN2CP42773 AC073592.4-201ENST00000623827 446 ntBASIC16.05■□□□□ 0.16
CDKN2CP42773 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDKN2CP42773 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.05■□□□□ 0.16
CDKN2CP42773 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN2CP42773 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN2CP42773 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2CP42773 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2CP42773 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2CP42773 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2CP42773 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CDKN2CP42773 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2CP42773 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKN2CP42773 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.04■□□□□ 0.16
CDKN2CP42773 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 MIR5100-201ENST00000579544 119 ntBASIC16.04■□□□□ 0.16
CDKN2CP42773 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2CP42773 AC092119.3-201ENST00000612618 583 ntBASIC16.04■□□□□ 0.16
CDKN2CP42773 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDKN2CP42773 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2CP42773 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
CDKN2CP42773 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2CP42773 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.04■□□□□ 0.16
CDKN2CP42773 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDKN2CP42773 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2CP42773 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2CP42773 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.03■□□□□ 0.16
CDKN2CP42773 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2CP42773 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDKN2CP42773 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2CP42773 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDKN2CP42773 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2CP42773 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2CP42773 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2CP42773 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2CP42773 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CDKN2CP42773 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms