Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
GDNFP39905 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
GDNFP39905 IGHGP-201ENST00000390555 1178 ntBASIC14.82□□□□□ -0.04
GDNFP39905 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.82□□□□□ -0.04
GDNFP39905 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
GDNFP39905 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC14.82□□□□□ -0.04
GDNFP39905 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GDNFP39905 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
GDNFP39905 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
GDNFP39905 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GDNFP39905 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.82□□□□□ -0.04
GDNFP39905 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GDNFP39905 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GDNFP39905 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.81□□□□□ -0.04
GDNFP39905 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.81□□□□□ -0.04
GDNFP39905 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.81□□□□□ -0.04
GDNFP39905 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.81□□□□□ -0.04
GDNFP39905 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC14.81□□□□□ -0.04
GDNFP39905 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.81□□□□□ -0.04
GDNFP39905 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 DBET-201ENST00000630918 3363 ntBASIC14.81□□□□□ -0.04
GDNFP39905 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.81□□□□□ -0.04
GDNFP39905 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.81□□□□□ -0.04
GDNFP39905 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDNFP39905 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GDNFP39905 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.8□□□□□ -0.04
GDNFP39905 HLA-A-202ENST00000376806 1854 ntBASIC14.8□□□□□ -0.04
GDNFP39905 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.8□□□□□ -0.04
GDNFP39905 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.8□□□□□ -0.04
GDNFP39905 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
GDNFP39905 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.8□□□□□ -0.04
GDNFP39905 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GDNFP39905 AL031133.1-201ENST00000406807 723 ntBASIC14.8□□□□□ -0.04
GDNFP39905 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.8□□□□□ -0.04
GDNFP39905 LINC01238-205ENST00000567549 1107 ntBASIC14.8□□□□□ -0.04
GDNFP39905 AC005332.3-201ENST00000589904 676 ntBASIC14.8□□□□□ -0.04
GDNFP39905 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.8□□□□□ -0.04
GDNFP39905 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
GDNFP39905 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 AC092384.3-202ENST00000564646 2873 ntBASIC14.8□□□□□ -0.04
GDNFP39905 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDNFP39905 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms