Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.01□□□□□ -0.17
SNCAP37840 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 AC079602.3-201ENST00000623931 403 ntBASIC14.01□□□□□ -0.17
SNCAP37840 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SNCAP37840 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SNCAP37840 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.01□□□□□ -0.17
SNCAP37840 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
SNCAP37840 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SNCAP37840 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SNCAP37840 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14□□□□□ -0.17
SNCAP37840 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SNCAP37840 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14□□□□□ -0.17
SNCAP37840 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SNCAP37840 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SNCAP37840 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SNCAP37840 STARP1-201ENST00000397973 869 ntBASIC14□□□□□ -0.17
SNCAP37840 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14□□□□□ -0.17
SNCAP37840 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14□□□□□ -0.17
SNCAP37840 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 TBC1D3P5-201ENST00000579401 1545 ntBASIC14□□□□□ -0.17
SNCAP37840 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14□□□□□ -0.17
SNCAP37840 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SNCAP37840 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SNCAP37840 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms