Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.06■□□□□ 0.32
KRT4P19013 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT4P19013 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
KRT4P19013 AL353801.3-201ENST00000609898 542 ntBASIC17.06■□□□□ 0.32
KRT4P19013 AC073912.3-201ENST00000624414 853 ntBASIC17.06■□□□□ 0.32
KRT4P19013 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.06■□□□□ 0.32
KRT4P19013 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
KRT4P19013 AC005052.1-201ENST00000625181 2492 ntBASIC17.06■□□□□ 0.32
KRT4P19013 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.06■□□□□ 0.32
KRT4P19013 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
KRT4P19013 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 AC132938.5-201ENST00000624980 1813 ntBASIC17.05■□□□□ 0.32
KRT4P19013 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
KRT4P19013 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
KRT4P19013 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 HOMER2P1-201ENST00000455653 964 ntBASIC17.05■□□□□ 0.32
KRT4P19013 RN7SL606P-201ENST00000472779 293 ntBASIC17.05■□□□□ 0.32
KRT4P19013 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.05■□□□□ 0.32
KRT4P19013 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
KRT4P19013 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
KRT4P19013 AL513477.1-201ENST00000602865 2407 ntBASIC17.05■□□□□ 0.32
KRT4P19013 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
KRT4P19013 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
KRT4P19013 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT4P19013 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT4P19013 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT4P19013 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.04■□□□□ 0.32
KRT4P19013 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT4P19013 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT4P19013 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
KRT4P19013 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
KRT4P19013 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 MTHFR-217ENST00000641820 1569 ntBASIC17.04■□□□□ 0.32
KRT4P19013 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
KRT4P19013 AC003669.1-201ENST00000334569 611 ntBASIC17.04■□□□□ 0.32
KRT4P19013 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.04■□□□□ 0.32
KRT4P19013 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms