Protein–RNA interactions for Protein: P13762

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4P13762 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 LINC02012-201ENST00000608206 1725 ntBASIC12.82□□□□□ -0.36
HLA-DRB4P13762 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.82□□□□□ -0.36
HLA-DRB4P13762 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
HLA-DRB4P13762 PCDHA1-201ENST00000378133 2726 ntBASIC12.82□□□□□ -0.36
HLA-DRB4P13762 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 EGFEM1P-202ENST00000431685 1563 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PRYP5-201ENST00000451909 266 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 SCARNA2-201ENST00000458748 420 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 MTDHP3-201ENST00000594186 672 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 AC008608.2-201ENST00000606089 416 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 AC012313.10-201ENST00000623509 926 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 AL022326.1-202ENST00000641533 845 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC12.81□□□□□ -0.36
HLA-DRB4P13762 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
HLA-DRB4P13762 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DRB4P13762 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms