Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.4■□□□□ 0.38
TOP3BO95985 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 SPCS2P1-201ENST00000561636 679 ntBASIC17.4■□□□□ 0.38
TOP3BO95985 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.4■□□□□ 0.38
TOP3BO95985 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 AP002472.1-201ENST00000577490 586 ntBASIC17.4■□□□□ 0.38
TOP3BO95985 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.4■□□□□ 0.38
TOP3BO95985 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 AL139327.4-201ENST00000612362 153 ntBASIC17.4■□□□□ 0.38
TOP3BO95985 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TOP3BO95985 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.4■□□□□ 0.38
TOP3BO95985 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
TOP3BO95985 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.39■□□□□ 0.38
TOP3BO95985 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TOP3BO95985 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TOP3BO95985 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TOP3BO95985 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 PAWRP1-201ENST00000451083 565 ntBASIC17.39■□□□□ 0.37
TOP3BO95985 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.39■□□□□ 0.37
TOP3BO95985 YBX1P5-201ENST00000509441 847 ntBASIC17.39■□□□□ 0.37
TOP3BO95985 NKAPP1-205ENST00000585790 367 ntBASIC17.39■□□□□ 0.37
TOP3BO95985 MTDHP4-201ENST00000600287 670 ntBASIC17.39■□□□□ 0.37
TOP3BO95985 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.39■□□□□ 0.37
TOP3BO95985 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.39■□□□□ 0.37
TOP3BO95985 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.39■□□□□ 0.37
TOP3BO95985 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.39■□□□□ 0.37
TOP3BO95985 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TOP3BO95985 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP3BO95985 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP3BO95985 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP3BO95985 AC254562.1-201ENST00000417586 456 ntBASIC17.38■□□□□ 0.37
TOP3BO95985 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.38■□□□□ 0.37
TOP3BO95985 CNN2P11-201ENST00000429351 262 ntBASIC17.38■□□□□ 0.37
TOP3BO95985 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TOP3BO95985 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.38■□□□□ 0.37
TOP3BO95985 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 AC107918.4-202ENST00000641623 219 ntBASIC17.38■□□□□ 0.37
TOP3BO95985 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
TOP3BO95985 PKD1P1-201ENST00000458669 6805 ntBASIC17.38■□□□□ 0.37
TOP3BO95985 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.38■□□□□ 0.37
TOP3BO95985 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
TOP3BO95985 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP3BO95985 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP3BO95985 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP3BO95985 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP3BO95985 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP3BO95985 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TOP3BO95985 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP3BO95985 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP3BO95985 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.37■□□□□ 0.37
TOP3BO95985 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP3BO95985 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP3BO95985 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP3BO95985 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP3BO95985 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms