Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.83■□□□□ 0.6
CLSTN1O94985 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.83■□□□□ 0.6
CLSTN1O94985 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.83■□□□□ 0.6
CLSTN1O94985 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.83■□□□□ 0.6
CLSTN1O94985 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.83■□□□□ 0.6
CLSTN1O94985 BX005266.1-201ENST00000473402 457 ntBASIC18.83■□□□□ 0.6
CLSTN1O94985 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.83■□□□□ 0.6
CLSTN1O94985 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.83■□□□□ 0.6
CLSTN1O94985 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 AL139327.4-201ENST00000612362 153 ntBASIC18.83■□□□□ 0.6
CLSTN1O94985 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.83■□□□□ 0.6
CLSTN1O94985 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CLSTN1O94985 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLSTN1O94985 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CLSTN1O94985 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLSTN1O94985 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.82■□□□□ 0.6
CLSTN1O94985 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 AC005104.2-201ENST00000427818 678 ntBASIC18.82■□□□□ 0.6
CLSTN1O94985 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 EMBP1-201ENST00000458200 901 ntBASIC18.82■□□□□ 0.6
CLSTN1O94985 UNC93B7-201ENST00000509439 705 ntBASIC18.82■□□□□ 0.6
CLSTN1O94985 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLSTN1O94985 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLSTN1O94985 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLSTN1O94985 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.82■□□□□ 0.6
CLSTN1O94985 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 CROCCP2-202ENST00000412962 2773 ntBASIC18.81■□□□□ 0.6
CLSTN1O94985 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLSTN1O94985 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CLSTN1O94985 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.81■□□□□ 0.6
CLSTN1O94985 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.81■□□□□ 0.6
CLSTN1O94985 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CLSTN1O94985 RN7SL510P-201ENST00000581311 263 ntBASIC18.81■□□□□ 0.6
CLSTN1O94985 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.81■□□□□ 0.6
CLSTN1O94985 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLSTN1O94985 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CLSTN1O94985 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.81■□□□□ 0.6
CLSTN1O94985 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLSTN1O94985 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms