Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.21■□□□□ 0.35
USP1O94782 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.21■□□□□ 0.35
USP1O94782 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.21■□□□□ 0.35
USP1O94782 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.21■□□□□ 0.35
USP1O94782 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.21■□□□□ 0.35
USP1O94782 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
USP1O94782 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.21■□□□□ 0.35
USP1O94782 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
USP1O94782 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.21■□□□□ 0.34
USP1O94782 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.21■□□□□ 0.34
USP1O94782 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.21■□□□□ 0.34
USP1O94782 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.2■□□□□ 0.34
USP1O94782 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.2■□□□□ 0.34
USP1O94782 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.2■□□□□ 0.34
USP1O94782 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.2■□□□□ 0.34
USP1O94782 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 LINC00982-205ENST00000420957 435 ntBASIC17.2■□□□□ 0.34
USP1O94782 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.2■□□□□ 0.34
USP1O94782 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
USP1O94782 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.2■□□□□ 0.34
USP1O94782 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.2■□□□□ 0.34
USP1O94782 AL591684.3-201ENST00000605187 298 ntBASIC17.2■□□□□ 0.34
USP1O94782 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.2■□□□□ 0.34
USP1O94782 AL603756.1-201ENST00000606511 2163 ntBASIC17.2■□□□□ 0.34
USP1O94782 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.2■□□□□ 0.34
USP1O94782 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 HYMAI-201ENST00000635591 3347 ntBASIC17.2■□□□□ 0.34
USP1O94782 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
USP1O94782 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.19■□□□□ 0.34
USP1O94782 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 KRT16P4-201ENST00000453883 522 ntBASIC17.19■□□□□ 0.34
USP1O94782 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 DUX4L17-201ENST00000557360 1267 ntBASIC17.19■□□□□ 0.34
USP1O94782 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
USP1O94782 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 AP005117.1-201ENST00000584346 1413 ntBASIC17.19■□□□□ 0.34
USP1O94782 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.19■□□□□ 0.34
USP1O94782 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
USP1O94782 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
USP1O94782 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
USP1O94782 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.18■□□□□ 0.34
USP1O94782 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP1O94782 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms