Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.89■□□□□ 0.29
KLHL41O60662 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.89■□□□□ 0.29
KLHL41O60662 AC104692.2-201ENST00000603054 253 ntBASIC16.89■□□□□ 0.29
KLHL41O60662 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.89■□□□□ 0.29
KLHL41O60662 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 NSUN5P1-202ENST00000421140 1535 ntBASIC16.89■□□□□ 0.29
KLHL41O60662 NSUN5P2-203ENST00000457352 1529 ntBASIC16.89■□□□□ 0.29
KLHL41O60662 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
KLHL41O60662 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.89■□□□□ 0.29
KLHL41O60662 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KLHL41O60662 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.89■□□□□ 0.29
KLHL41O60662 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.88■□□□□ 0.29
KLHL41O60662 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.88■□□□□ 0.29
KLHL41O60662 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.88■□□□□ 0.29
KLHL41O60662 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 AC002558.1-201ENST00000488906 803 ntBASIC16.88■□□□□ 0.29
KLHL41O60662 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
KLHL41O60662 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.88■□□□□ 0.29
KLHL41O60662 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.88■□□□□ 0.29
KLHL41O60662 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.88■□□□□ 0.29
KLHL41O60662 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KLHL41O60662 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
KLHL41O60662 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 AC132872.4-202ENST00000622924 2756 ntBASIC16.88■□□□□ 0.29
KLHL41O60662 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KLHL41O60662 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.87■□□□□ 0.29
KLHL41O60662 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
KLHL41O60662 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.87■□□□□ 0.29
KLHL41O60662 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KLHL41O60662 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.87■□□□□ 0.29
KLHL41O60662 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.87■□□□□ 0.29
KLHL41O60662 AP002469.2-201ENST00000531724 424 ntBASIC16.87■□□□□ 0.29
KLHL41O60662 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.87■□□□□ 0.29
KLHL41O60662 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
KLHL41O60662 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.87■□□□□ 0.29
KLHL41O60662 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KLHL41O60662 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms