Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SSSCA1O60232 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SSSCA1O60232 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.88□□□□□ -0.19
SSSCA1O60232 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SSSCA1O60232 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.88□□□□□ -0.19
SSSCA1O60232 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSSCA1O60232 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.88□□□□□ -0.19
SSSCA1O60232 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.88□□□□□ -0.19
SSSCA1O60232 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.88□□□□□ -0.19
SSSCA1O60232 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.87□□□□□ -0.19
SSSCA1O60232 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SSSCA1O60232 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 HMGA1P5-201ENST00000412453 271 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
SSSCA1O60232 TSPY7P-201ENST00000431358 1114 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.87□□□□□ -0.19
SSSCA1O60232 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.87□□□□□ -0.19
SSSCA1O60232 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 ECEL1P2-202ENST00000465689 757 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 FAM87A-204ENST00000613235 858 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.87□□□□□ -0.19
SSSCA1O60232 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 AL645728.1-201ENST00000366221 2101 ntBASIC13.87□□□□□ -0.19
SSSCA1O60232 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.87□□□□□ -0.19
SSSCA1O60232 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SSSCA1O60232 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SSSCA1O60232 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.86□□□□□ -0.19
SSSCA1O60232 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SSSCA1O60232 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SSSCA1O60232 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.86□□□□□ -0.19
SSSCA1O60232 ECEL1P3-201ENST00000427961 737 ntBASIC13.86□□□□□ -0.19
SSSCA1O60232 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC13.86□□□□□ -0.19
SSSCA1O60232 RASA4DP-201ENST00000460726 1199 ntBASIC13.86□□□□□ -0.19
SSSCA1O60232 AC068472.1-201ENST00000474589 881 ntBASIC13.86□□□□□ -0.19
SSSCA1O60232 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms