Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.57■□□□□ 0.4
MSI1O43347 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 MCCD1P2-201ENST00000423228 335 ntBASIC17.57■□□□□ 0.4
MSI1O43347 GPX1P2-201ENST00000429271 606 ntBASIC17.57■□□□□ 0.4
MSI1O43347 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.57■□□□□ 0.4
MSI1O43347 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.57■□□□□ 0.4
MSI1O43347 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.57■□□□□ 0.4
MSI1O43347 AC005412.3-201ENST00000580309 715 ntBASIC17.57■□□□□ 0.4
MSI1O43347 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.57■□□□□ 0.4
MSI1O43347 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.57■□□□□ 0.4
MSI1O43347 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.57■□□□□ 0.4
MSI1O43347 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
MSI1O43347 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 AL121761.2-201ENST00000598007 1648 ntBASIC17.57■□□□□ 0.4
MSI1O43347 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.57■□□□□ 0.4
MSI1O43347 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.57■□□□□ 0.4
MSI1O43347 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
MSI1O43347 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
MSI1O43347 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
MSI1O43347 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 AC074386.1-202ENST00000463561 864 ntBASIC17.56■□□□□ 0.4
MSI1O43347 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.56■□□□□ 0.4
MSI1O43347 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.56■□□□□ 0.4
MSI1O43347 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.56■□□□□ 0.4
MSI1O43347 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.56■□□□□ 0.4
MSI1O43347 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
MSI1O43347 AL353732.1-201ENST00000569618 1459 ntBASIC17.56■□□□□ 0.4
MSI1O43347 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
MSI1O43347 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
MSI1O43347 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.55■□□□□ 0.4
MSI1O43347 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MSI1O43347 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
MSI1O43347 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
MSI1O43347 RPSAP43-201ENST00000402237 625 ntBASIC17.55■□□□□ 0.4
MSI1O43347 UPF3AP3-201ENST00000420996 769 ntBASIC17.55■□□□□ 0.4
MSI1O43347 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.55■□□□□ 0.4
MSI1O43347 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.55■□□□□ 0.4
MSI1O43347 MPDU1-223ENST00000582151 728 ntBASIC17.55■□□□□ 0.4
MSI1O43347 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.55■□□□□ 0.4
MSI1O43347 MTDHP5-201ENST00000598980 586 ntBASIC17.55■□□□□ 0.4
MSI1O43347 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.55■□□□□ 0.4
MSI1O43347 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
MSI1O43347 AC005915.1-201ENST00000624912 2018 ntBASIC17.55■□□□□ 0.4
MSI1O43347 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
MSI1O43347 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
MSI1O43347 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
MSI1O43347 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
MSI1O43347 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.54■□□□□ 0.4
MSI1O43347 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 MIR1233-2-201ENST00000408138 82 ntBASIC17.54■□□□□ 0.4
MSI1O43347 MIR1233-1-201ENST00000408722 82 ntBASIC17.54■□□□□ 0.4
MSI1O43347 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.54■□□□□ 0.4
MSI1O43347 DNAJB3-201ENST00000446806 729 ntBASIC17.54■□□□□ 0.4
MSI1O43347 AC112482.1-201ENST00000492080 688 ntBASIC17.54■□□□□ 0.4
MSI1O43347 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
MSI1O43347 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.54■□□□□ 0.4
MSI1O43347 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.54■□□□□ 0.4
MSI1O43347 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms