Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PFDN6O15212 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
PFDN6O15212 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN6O15212 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.02■□□□□ 0.32
PFDN6O15212 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.02■□□□□ 0.32
PFDN6O15212 AL353135.1-201ENST00000606729 504 ntBASIC17.02■□□□□ 0.32
PFDN6O15212 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.02■□□□□ 0.32
PFDN6O15212 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PFDN6O15212 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 AC068587.6-202ENST00000641839 5619 ntBASIC17.02■□□□□ 0.31
PFDN6O15212 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.02■□□□□ 0.31
PFDN6O15212 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.02■□□□□ 0.31
PFDN6O15212 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PFDN6O15212 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PFDN6O15212 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PFDN6O15212 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.01■□□□□ 0.31
PFDN6O15212 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.01■□□□□ 0.31
PFDN6O15212 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.01■□□□□ 0.31
PFDN6O15212 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 AC105020.1-201ENST00000435356 2205 ntBASIC17.01■□□□□ 0.31
PFDN6O15212 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PFDN6O15212 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PFDN6O15212 AC018695.7-201ENST00000624587 2492 ntBASIC17.01■□□□□ 0.31
PFDN6O15212 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PFDN6O15212 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PFDN6O15212 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17■□□□□ 0.31
PFDN6O15212 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17■□□□□ 0.31
PFDN6O15212 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17■□□□□ 0.31
PFDN6O15212 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17■□□□□ 0.31
PFDN6O15212 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17■□□□□ 0.31
PFDN6O15212 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 KRT18P56-201ENST00000507275 550 ntBASIC17■□□□□ 0.31
PFDN6O15212 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17■□□□□ 0.31
PFDN6O15212 AC092068.3-201ENST00000587894 2016 ntBASIC17■□□□□ 0.31
PFDN6O15212 MTDHP4-201ENST00000600287 670 ntBASIC17■□□□□ 0.31
PFDN6O15212 AL139424.1-201ENST00000607572 797 ntBASIC17■□□□□ 0.31
PFDN6O15212 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17■□□□□ 0.31
PFDN6O15212 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17■□□□□ 0.31
PFDN6O15212 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms