Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 DNAJB3-202ENST00000449667 1266 ntBASIC17.61■□□□□ 0.41
SRRM3A6NNA2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 CYMP-203ENST00000474680 1263 ntBASIC17.61■□□□□ 0.41
SRRM3A6NNA2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 FAM215A-202ENST00000632077 792 ntBASIC17.61■□□□□ 0.41
SRRM3A6NNA2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 KRT18P28-201ENST00000453838 1332 ntBASIC17.61■□□□□ 0.41
SRRM3A6NNA2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 AC092171.3-201ENST00000610122 2651 ntBASIC17.61■□□□□ 0.41
SRRM3A6NNA2 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SRRM3A6NNA2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 AC145285.3-201ENST00000564603 959 ntBASIC17.6■□□□□ 0.41
SRRM3A6NNA2 MIR3917-201ENST00000580971 93 ntBASIC17.6■□□□□ 0.41
SRRM3A6NNA2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 KRT8P7-201ENST00000533003 1432 ntBASIC17.6■□□□□ 0.41
SRRM3A6NNA2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 AC126177.1-201ENST00000547829 2218 ntBASIC17.6■□□□□ 0.41
SRRM3A6NNA2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SRRM3A6NNA2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 AC104109.2-201ENST00000602919 1418 ntBASIC17.59■□□□□ 0.41
SRRM3A6NNA2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 SLC25A1P3-201ENST00000395415 828 ntBASIC17.59■□□□□ 0.41
SRRM3A6NNA2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SRRM3A6NNA2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms