Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM235A6NFC5 AC063926.3-201ENST00000624734 5658 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AC103702.1-201ENST00000548801 2630 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 Z83836.1-201ENST00000624605 1642 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AC122714.2-201ENST00000502787 707 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AP006294.2-201ENST00000641667 209 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 AL365203.3-201ENST00000609742 2057 ntBASIC14.53□□□□□ -0.08
TMEM235A6NFC5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.53□□□□□ -0.08
TMEM235A6NFC5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 TUBB8P12-201ENST00000308911 1335 ntBASIC14.52□□□□□ -0.08
TMEM235A6NFC5 TUBB7P-202ENST00000428444 1305 ntBASIC14.52□□□□□ -0.08
TMEM235A6NFC5 TUBB8P7-204ENST00000567960 1332 ntBASIC14.52□□□□□ -0.08
TMEM235A6NFC5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TMEM235A6NFC5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TMEM235A6NFC5 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TMEM235A6NFC5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms