Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AL021920.2-201ENST00000624828 1351 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 FZD10-202ENST00000539839 3282 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AC116353.5-201ENST00000638148 1699 ntBASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TBC1D3FA6NER0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3FA6NER0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3FA6NER0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3FA6NER0 AC026471.1-201ENST00000564629 3026 ntBASIC16.83■□□□□ 0.29
TBC1D3FA6NER0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3FA6NER0 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
TBC1D3FA6NER0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 SLC25A1P3-201ENST00000395415 828 ntBASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 AC243562.1-201ENST00000560672 389 ntBASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 AC091167.2-201ENST00000579581 588 ntBASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TBC1D3FA6NER0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 MIR770-201ENST00000390219 98 ntBASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 IGHV3-62-201ENST00000520057 340 ntBASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 AC087641.1-201ENST00000557561 1021 ntBASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 AC093520.2-201ENST00000561830 333 ntBASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 AC093512.1-201ENST00000617969 520 ntBASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TBC1D3FA6NER0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms