Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 AC103564.2-201ENST00000432853 1299 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 STK19B-204ENST00000512515 211 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 RNF126P1-202ENST00000569893 925 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 MIR4497-201ENST00000583208 89 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 AC073912.3-201ENST00000624414 853 ntBASIC14.8□□□□□ -0.04
SHISA3A0PJX4 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.8□□□□□ -0.04
SHISA3A0PJX4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 MMP23A-201ENST00000234610 1017 ntBASIC14.79□□□□□ -0.04
SHISA3A0PJX4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 STARP1-201ENST00000397973 869 ntBASIC14.79□□□□□ -0.04
SHISA3A0PJX4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.79□□□□□ -0.04
SHISA3A0PJX4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 AC005336.2-201ENST00000593183 939 ntBASIC14.79□□□□□ -0.04
SHISA3A0PJX4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 AL138831.2-201ENST00000606564 490 ntBASIC14.79□□□□□ -0.04
SHISA3A0PJX4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.79□□□□□ -0.04
SHISA3A0PJX4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.78□□□□□ -0.04
SHISA3A0PJX4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms