Protein–RNA interactions for Protein: Q9Y5H7

PCDHA5, Protocadherin alpha-5, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA5Q9Y5H7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHA5Q9Y5H7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.92■■□□□ 1.9
PCDHA5Q9Y5H7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHA5Q9Y5H7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.92■■□□□ 1.9
PCDHA5Q9Y5H7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.91■■□□□ 1.9
PCDHA5Q9Y5H7 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA5Q9Y5H7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA5Q9Y5H7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.9■■□□□ 1.9
PCDHA5Q9Y5H7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHA5Q9Y5H7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA5Q9Y5H7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA5Q9Y5H7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.89■■□□□ 1.9
PCDHA5Q9Y5H7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA5Q9Y5H7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.89■■□□□ 1.9
PCDHA5Q9Y5H7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA5Q9Y5H7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.89
PCDHA5Q9Y5H7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA5Q9Y5H7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA5Q9Y5H7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA5Q9Y5H7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA5Q9Y5H7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA5Q9Y5H7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA5Q9Y5H7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
PCDHA5Q9Y5H7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA5Q9Y5H7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA5Q9Y5H7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHA5Q9Y5H7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA5Q9Y5H7 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 AL157400.5-201ENST00000507624 621 ntBASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 MIR4449-201ENST00000578365 66 ntBASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.86■■□□□ 1.89
PCDHA5Q9Y5H7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA5Q9Y5H7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA5Q9Y5H7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA5Q9Y5H7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.85■■□□□ 1.89
PCDHA5Q9Y5H7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
PCDHA5Q9Y5H7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
PCDHA5Q9Y5H7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA5Q9Y5H7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA5Q9Y5H7 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.84■■□□□ 1.89
PCDHA5Q9Y5H7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA5Q9Y5H7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA5Q9Y5H7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
PCDHA5Q9Y5H7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA5Q9Y5H7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA5Q9Y5H7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA5Q9Y5H7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA5Q9Y5H7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA5Q9Y5H7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
PCDHA5Q9Y5H7 AL139125.2-201ENST00000623134 1869 ntBASIC26.83■■□□□ 1.88
PCDHA5Q9Y5H7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA5Q9Y5H7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA5Q9Y5H7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.82■■□□□ 1.88
PCDHA5Q9Y5H7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA5Q9Y5H7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA5Q9Y5H7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
PCDHA5Q9Y5H7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA5Q9Y5H7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.81■■□□□ 1.88
PCDHA5Q9Y5H7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.81■■□□□ 1.88
PCDHA5Q9Y5H7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA5Q9Y5H7 AC097639.1-201ENST00000565519 1891 ntBASIC26.81■■□□□ 1.88
PCDHA5Q9Y5H7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
PCDHA5Q9Y5H7 AC060814.1-201ENST00000554326 538 ntBASIC26.8■■□□□ 1.88
PCDHA5Q9Y5H7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA5Q9Y5H7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA5Q9Y5H7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.8■■□□□ 1.88
PCDHA5Q9Y5H7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
PCDHA5Q9Y5H7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
PCDHA5Q9Y5H7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA5Q9Y5H7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA5Q9Y5H7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.79■■□□□ 1.88
PCDHA5Q9Y5H7 AC025884.2-201ENST00000553429 711 ntBASIC26.79■■□□□ 1.88
PCDHA5Q9Y5H7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA5Q9Y5H7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
PCDHA5Q9Y5H7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA5Q9Y5H7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA5Q9Y5H7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
PCDHA5Q9Y5H7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
PCDHA5Q9Y5H7 SLC6A10P-202ENST00000431994 2058 ntBASIC26.77■■□□□ 1.88
PCDHA5Q9Y5H7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC26.77■■□□□ 1.88
PCDHA5Q9Y5H7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.77■■□□□ 1.88
PCDHA5Q9Y5H7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHA5Q9Y5H7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.77■■□□□ 1.88
PCDHA5Q9Y5H7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
PCDHA5Q9Y5H7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms