Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.36■■□□□ 1.01
C12orf49Q9H741 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
C12orf49Q9H741 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf49Q9H741 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
C12orf49Q9H741 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
C12orf49Q9H741 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
C12orf49Q9H741 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.35■■□□□ 1.01
C12orf49Q9H741 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
C12orf49Q9H741 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf49Q9H741 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
C12orf49Q9H741 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.34■■□□□ 1.01
C12orf49Q9H741 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.33■■□□□ 1.01
C12orf49Q9H741 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf49Q9H741 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf49Q9H741 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
C12orf49Q9H741 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.33■■□□□ 1.01
C12orf49Q9H741 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
C12orf49Q9H741 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.33■■□□□ 1
C12orf49Q9H741 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.32■■□□□ 1
C12orf49Q9H741 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.31■■□□□ 1
C12orf49Q9H741 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.31■■□□□ 1
C12orf49Q9H741 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.31■■□□□ 1
C12orf49Q9H741 KRT8P33-201ENST00000508125 1423 ntBASIC21.3■■□□□ 1
C12orf49Q9H741 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
C12orf49Q9H741 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.3■■□□□ 1
C12orf49Q9H741 RARRES2P1-201ENST00000474487 481 ntBASIC21.3■■□□□ 1
C12orf49Q9H741 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
C12orf49Q9H741 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.3■■□□□ 1
C12orf49Q9H741 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.3■■□□□ 1
C12orf49Q9H741 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.29■■□□□ 1
C12orf49Q9H741 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C12orf49Q9H741 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.29■■□□□ 1
C12orf49Q9H741 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.29■■□□□ 1
C12orf49Q9H741 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C12orf49Q9H741 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
C12orf49Q9H741 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.28■■□□□ 1
C12orf49Q9H741 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
C12orf49Q9H741 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.28■■□□□ 1
C12orf49Q9H741 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.28■■□□□ 1
C12orf49Q9H741 RPS2P7-201ENST00000447334 885 ntBASIC21.28■■□□□ 1
C12orf49Q9H741 AC074183.2-201ENST00000623112 922 ntBASIC21.28■■□□□ 1
C12orf49Q9H741 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.28■■□□□ 1
C12orf49Q9H741 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.27■■□□□ 1
C12orf49Q9H741 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
C12orf49Q9H741 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.27■■□□□ 1
C12orf49Q9H741 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.27■■□□□ 1
C12orf49Q9H741 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.27■■□□□ 1
C12orf49Q9H741 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.27■■□□□ 1
C12orf49Q9H741 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.27■■□□□ 1
C12orf49Q9H741 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
C12orf49Q9H741 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
C12orf49Q9H741 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
C12orf49Q9H741 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.27■□□□□ 0.99
C12orf49Q9H741 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
C12orf49Q9H741 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf49Q9H741 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.26■□□□□ 0.99
C12orf49Q9H741 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
C12orf49Q9H741 AC087393.1-201ENST00000582896 145 ntBASIC21.26■□□□□ 0.99
C12orf49Q9H741 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
C12orf49Q9H741 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf49Q9H741 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf49Q9H741 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf49Q9H741 PVT1_1.1-201ENST00000615125 194 ntBASIC21.25■□□□□ 0.99
C12orf49Q9H741 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf49Q9H741 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf49Q9H741 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
C12orf49Q9H741 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
C12orf49Q9H741 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C12orf49Q9H741 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
C12orf49Q9H741 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.24■□□□□ 0.99
C12orf49Q9H741 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
C12orf49Q9H741 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.24■□□□□ 0.99
C12orf49Q9H741 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
C12orf49Q9H741 KRT18P10-201ENST00000388836 1287 ntBASIC21.23■□□□□ 0.99
C12orf49Q9H741 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf49Q9H741 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf49Q9H741 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf49Q9H741 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.23■□□□□ 0.99
C12orf49Q9H741 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.23■□□□□ 0.99
C12orf49Q9H741 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf49Q9H741 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf49Q9H741 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
C12orf49Q9H741 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.23■□□□□ 0.99
C12orf49Q9H741 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.22■□□□□ 0.99
C12orf49Q9H741 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 ERN1-208ENST00000606895 2068 ntBASIC21.22■□□□□ 0.99
C12orf49Q9H741 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
C12orf49Q9H741 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
C12orf49Q9H741 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf49Q9H741 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf49Q9H741 YBX1P4-201ENST00000392794 808 ntBASIC21.21■□□□□ 0.99
C12orf49Q9H741 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.21■□□□□ 0.99
C12orf49Q9H741 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
C12orf49Q9H741 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms