Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PCNX3Q9H6A9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCNX3Q9H6A9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.93■■□□□ 1.1
PCNX3Q9H6A9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCNX3Q9H6A9 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCNX3Q9H6A9 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCNX3Q9H6A9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCNX3Q9H6A9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNX3Q9H6A9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.92■■□□□ 1.1
PCNX3Q9H6A9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.92■■□□□ 1.1
PCNX3Q9H6A9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCNX3Q9H6A9 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PCNX3Q9H6A9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
PCNX3Q9H6A9 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCNX3Q9H6A9 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.91■■□□□ 1.1
PCNX3Q9H6A9 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCNX3Q9H6A9 AC012354.3-201ENST00000623734 483 ntBASIC21.9■■□□□ 1.1
PCNX3Q9H6A9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCNX3Q9H6A9 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.9■■□□□ 1.1
PCNX3Q9H6A9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCNX3Q9H6A9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCNX3Q9H6A9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCNX3Q9H6A9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.89■■□□□ 1.1
PCNX3Q9H6A9 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
PCNX3Q9H6A9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
PCNX3Q9H6A9 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCNX3Q9H6A9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PCNX3Q9H6A9 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 DUSP8P4-201ENST00000399538 1761 ntBASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.88■■□□□ 1.09
PCNX3Q9H6A9 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCNX3Q9H6A9 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCNX3Q9H6A9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCNX3Q9H6A9 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCNX3Q9H6A9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCNX3Q9H6A9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCNX3Q9H6A9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.85■■□□□ 1.09
PCNX3Q9H6A9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCNX3Q9H6A9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCNX3Q9H6A9 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCNX3Q9H6A9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 AL033527.3-201ENST00000566366 1196 ntBASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCNX3Q9H6A9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCNX3Q9H6A9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.83■■□□□ 1.09
PCNX3Q9H6A9 AC004987.1-201ENST00000428627 508 ntBASIC21.83■■□□□ 1.09
PCNX3Q9H6A9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.83■■□□□ 1.09
PCNX3Q9H6A9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.08
PCNX3Q9H6A9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.82■■□□□ 1.08
PCNX3Q9H6A9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCNX3Q9H6A9 TSPY13P-201ENST00000338964 914 ntBASIC21.81■■□□□ 1.08
PCNX3Q9H6A9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCNX3Q9H6A9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PCNX3Q9H6A9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.8■■□□□ 1.08
PCNX3Q9H6A9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCNX3Q9H6A9 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCNX3Q9H6A9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.8■■□□□ 1.08
PCNX3Q9H6A9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.8■■□□□ 1.08
PCNX3Q9H6A9 AC097639.1-201ENST00000565519 1891 ntBASIC21.8■■□□□ 1.08
PCNX3Q9H6A9 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCNX3Q9H6A9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCNX3Q9H6A9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCNX3Q9H6A9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms