Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NELFAQ9H3P2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NELFAQ9H3P2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 ERN1-208ENST00000606895 2068 ntBASIC21.34■■□□□ 1.01
NELFAQ9H3P2 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NELFAQ9H3P2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
NELFAQ9H3P2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NELFAQ9H3P2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
NELFAQ9H3P2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NELFAQ9H3P2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.33■■□□□ 1
NELFAQ9H3P2 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
NELFAQ9H3P2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NELFAQ9H3P2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.32■■□□□ 1
NELFAQ9H3P2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.32■■□□□ 1
NELFAQ9H3P2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NELFAQ9H3P2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NELFAQ9H3P2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.32■■□□□ 1
NELFAQ9H3P2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.32■■□□□ 1
NELFAQ9H3P2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NELFAQ9H3P2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NELFAQ9H3P2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.31■■□□□ 1
NELFAQ9H3P2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.31■■□□□ 1
NELFAQ9H3P2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.31■■□□□ 1
NELFAQ9H3P2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.31■■□□□ 1
NELFAQ9H3P2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
NELFAQ9H3P2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.3■■□□□ 1
NELFAQ9H3P2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NELFAQ9H3P2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NELFAQ9H3P2 NTF6A-201ENST00000591175 560 ntBASIC21.3■■□□□ 1
NELFAQ9H3P2 AC133552.2-201ENST00000619106 1032 ntBASIC21.3■■□□□ 1
NELFAQ9H3P2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NELFAQ9H3P2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NELFAQ9H3P2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.3■■□□□ 1
NELFAQ9H3P2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
NELFAQ9H3P2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
NELFAQ9H3P2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NELFAQ9H3P2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.29■■□□□ 1
NELFAQ9H3P2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NELFAQ9H3P2 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NELFAQ9H3P2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NELFAQ9H3P2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NELFAQ9H3P2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
NELFAQ9H3P2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.28■■□□□ 1
NELFAQ9H3P2 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
NELFAQ9H3P2 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.28■■□□□ 1
NELFAQ9H3P2 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.28■■□□□ 1
NELFAQ9H3P2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.28■■□□□ 1
NELFAQ9H3P2 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NELFAQ9H3P2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NELFAQ9H3P2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.27■■□□□ 1
NELFAQ9H3P2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.27■■□□□ 1
NELFAQ9H3P2 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.27■■□□□ 1
NELFAQ9H3P2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.27■■□□□ 1
NELFAQ9H3P2 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NELFAQ9H3P2 AL592293.1-201ENST00000502889 1188 ntBASIC21.27■■□□□ 1
NELFAQ9H3P2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.27■■□□□ 1
NELFAQ9H3P2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
NELFAQ9H3P2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.27■■□□□ 1
NELFAQ9H3P2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
NELFAQ9H3P2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
NELFAQ9H3P2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
NELFAQ9H3P2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
NELFAQ9H3P2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
NELFAQ9H3P2 KRT18P60-201ENST00000312876 1297 ntBASIC21.25■□□□□ 0.99
NELFAQ9H3P2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.25■□□□□ 0.99
NELFAQ9H3P2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NELFAQ9H3P2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.25■□□□□ 0.99
NELFAQ9H3P2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NELFAQ9H3P2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
NELFAQ9H3P2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.24■□□□□ 0.99
NELFAQ9H3P2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
NELFAQ9H3P2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.24■□□□□ 0.99
NELFAQ9H3P2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
NELFAQ9H3P2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.24■□□□□ 0.99
NELFAQ9H3P2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
NELFAQ9H3P2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NELFAQ9H3P2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NELFAQ9H3P2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 AC096887.2-201ENST00000623443 1957 ntBASIC21.22■□□□□ 0.99
NELFAQ9H3P2 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.22■□□□□ 0.99
NELFAQ9H3P2 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NELFAQ9H3P2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.21■□□□□ 0.99
NELFAQ9H3P2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NELFAQ9H3P2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
NELFAQ9H3P2 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NELFAQ9H3P2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NELFAQ9H3P2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NELFAQ9H3P2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NELFAQ9H3P2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms