Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.12■□□□□ 0.81
CCL13Q99616 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL13Q99616 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL13Q99616 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CCL13Q99616 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CCL13Q99616 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CCL13Q99616 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CCL13Q99616 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL13Q99616 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL13Q99616 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL13Q99616 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CCL13Q99616 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CCL13Q99616 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.11■□□□□ 0.81
CCL13Q99616 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.11■□□□□ 0.81
CCL13Q99616 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CCL13Q99616 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCL13Q99616 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CCL13Q99616 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.1■□□□□ 0.81
CCL13Q99616 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CCL13Q99616 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.1■□□□□ 0.81
CCL13Q99616 AC129492.7-201ENST00000622992 756 ntBASIC20.1■□□□□ 0.81
CCL13Q99616 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 AC145676.1-201ENST00000514988 2004 ntBASIC20.09■□□□□ 0.81
CCL13Q99616 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 SPCS2P3-201ENST00000500401 656 ntBASIC20.09■□□□□ 0.81
CCL13Q99616 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCL13Q99616 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCL13Q99616 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCL13Q99616 AC010501.1-201ENST00000606270 1962 ntBASIC20.08■□□□□ 0.81
CCL13Q99616 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCL13Q99616 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCL13Q99616 DUX4L9-201ENST00000449051 1259 ntBASIC20.08■□□□□ 0.81
CCL13Q99616 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.08■□□□□ 0.81
CCL13Q99616 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCL13Q99616 AC018755.3-202ENST00000596210 929 ntBASIC20.08■□□□□ 0.81
CCL13Q99616 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CCL13Q99616 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL13Q99616 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCL13Q99616 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCL13Q99616 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL13Q99616 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.07■□□□□ 0.8
CCL13Q99616 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCL13Q99616 DUSP8P4-201ENST00000399538 1761 ntBASIC20.07■□□□□ 0.8
CCL13Q99616 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CCL13Q99616 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CCL13Q99616 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CCL13Q99616 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.06■□□□□ 0.8
CCL13Q99616 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.06■□□□□ 0.8
CCL13Q99616 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.06■□□□□ 0.8
CCL13Q99616 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL13Q99616 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCL13Q99616 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCL13Q99616 DUX4L18-201ENST00000553347 1267 ntBASIC20.05■□□□□ 0.8
CCL13Q99616 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCL13Q99616 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL13Q99616 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL13Q99616 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL13Q99616 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.04■□□□□ 0.8
CCL13Q99616 AC012354.3-201ENST00000623734 483 ntBASIC20.04■□□□□ 0.8
CCL13Q99616 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCL13Q99616 AC096887.2-201ENST00000623443 1957 ntBASIC20.04■□□□□ 0.8
CCL13Q99616 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CCL13Q99616 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.03■□□□□ 0.8
CCL13Q99616 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CCL13Q99616 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.03■□□□□ 0.8
CCL13Q99616 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CCL13Q99616 AC004987.1-201ENST00000428627 508 ntBASIC20.03■□□□□ 0.8
CCL13Q99616 MIR6765-201ENST00000614092 87 ntBASIC20.03■□□□□ 0.8
CCL13Q99616 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CCL13Q99616 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CCL13Q99616 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CCL13Q99616 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CCL13Q99616 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CCL13Q99616 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.02■□□□□ 0.8
CCL13Q99616 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCL13Q99616 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.02■□□□□ 0.8
CCL13Q99616 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CCL13Q99616 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CCL13Q99616 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
CCL13Q99616 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.02■□□□□ 0.8
CCL13Q99616 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CCL13Q99616 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CCL13Q99616 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL13Q99616 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.01■□□□□ 0.79
CCL13Q99616 ATP5G2P3-201ENST00000429083 425 ntBASIC20.01■□□□□ 0.79
CCL13Q99616 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.01■□□□□ 0.79
CCL13Q99616 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCL13Q99616 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCL13Q99616 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL13Q99616 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCL13Q99616 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20■□□□□ 0.79
CCL13Q99616 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20■□□□□ 0.79
CCL13Q99616 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20■□□□□ 0.79
CCL13Q99616 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL13Q99616 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCL13Q99616 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms