Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AL031848.2-201ENST00000607670 837 ntBASIC19.58■□□□□ 0.72
ZNF48Q96MX3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZNF48Q96MX3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ZNF48Q96MX3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ZNF48Q96MX3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 RPS2P7-201ENST00000447334 885 ntBASIC19.56■□□□□ 0.72
ZNF48Q96MX3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.56■□□□□ 0.72
ZNF48Q96MX3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 AC019171.1-201ENST00000601251 1056 ntBASIC19.56■□□□□ 0.72
ZNF48Q96MX3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZNF48Q96MX3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 GUSBP5-201ENST00000418136 578 ntBASIC19.55■□□□□ 0.72
ZNF48Q96MX3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZNF48Q96MX3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZNF48Q96MX3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 LONRF2P2-201ENST00000439212 571 ntBASIC19.53■□□□□ 0.72
ZNF48Q96MX3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZNF48Q96MX3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.52■□□□□ 0.72
ZNF48Q96MX3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ZNF48Q96MX3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF48Q96MX3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.49■□□□□ 0.71
ZNF48Q96MX3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 AL592295.1-201ENST00000400984 884 ntBASIC19.48■□□□□ 0.71
ZNF48Q96MX3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF48Q96MX3 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms