Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
PJA1Q8NG27 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.8■■□□□ 1.56
PJA1Q8NG27 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
PJA1Q8NG27 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PJA1Q8NG27 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PJA1Q8NG27 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PJA1Q8NG27 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PJA1Q8NG27 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
PJA1Q8NG27 AL139246.5-201ENST00000606645 996 ntBASIC24.79■■□□□ 1.56
PJA1Q8NG27 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.79■■□□□ 1.56
PJA1Q8NG27 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC24.79■■□□□ 1.56
PJA1Q8NG27 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
PJA1Q8NG27 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PJA1Q8NG27 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PJA1Q8NG27 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.78■■□□□ 1.56
PJA1Q8NG27 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
PJA1Q8NG27 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PJA1Q8NG27 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.78■■□□□ 1.56
PJA1Q8NG27 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
PJA1Q8NG27 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
PJA1Q8NG27 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PJA1Q8NG27 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.77■■□□□ 1.56
PJA1Q8NG27 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
PJA1Q8NG27 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.77■■□□□ 1.56
PJA1Q8NG27 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
PJA1Q8NG27 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC24.77■■□□□ 1.56
PJA1Q8NG27 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PJA1Q8NG27 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC24.76■■□□□ 1.55
PJA1Q8NG27 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PJA1Q8NG27 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.76■■□□□ 1.55
PJA1Q8NG27 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.76■■□□□ 1.55
PJA1Q8NG27 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PJA1Q8NG27 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.76■■□□□ 1.55
PJA1Q8NG27 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PJA1Q8NG27 TSPY9P-201ENST00000440215 945 ntBASIC24.75■■□□□ 1.55
PJA1Q8NG27 TSPY11P-201ENST00000442607 1045 ntBASIC24.75■■□□□ 1.55
PJA1Q8NG27 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.75■■□□□ 1.55
PJA1Q8NG27 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PJA1Q8NG27 AC142086.6-201ENST00000621154 1765 ntBASIC24.75■■□□□ 1.55
PJA1Q8NG27 KRT18P24-201ENST00000344739 1156 ntBASIC24.74■■□□□ 1.55
PJA1Q8NG27 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PJA1Q8NG27 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.74■■□□□ 1.55
PJA1Q8NG27 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
PJA1Q8NG27 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.74■■□□□ 1.55
PJA1Q8NG27 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PJA1Q8NG27 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC24.74■■□□□ 1.55
PJA1Q8NG27 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PJA1Q8NG27 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
PJA1Q8NG27 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PJA1Q8NG27 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PJA1Q8NG27 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PJA1Q8NG27 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
PJA1Q8NG27 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PJA1Q8NG27 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.72■■□□□ 1.55
PJA1Q8NG27 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PJA1Q8NG27 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.72■■□□□ 1.55
PJA1Q8NG27 AC137630.3-201ENST00000607245 391 ntBASIC24.72■■□□□ 1.55
PJA1Q8NG27 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.72■■□□□ 1.55
PJA1Q8NG27 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.72■■□□□ 1.55
PJA1Q8NG27 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PJA1Q8NG27 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC24.72■■□□□ 1.55
PJA1Q8NG27 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.71■■□□□ 1.55
PJA1Q8NG27 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PJA1Q8NG27 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PJA1Q8NG27 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PJA1Q8NG27 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.71■■□□□ 1.55
PJA1Q8NG27 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PJA1Q8NG27 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PJA1Q8NG27 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
PJA1Q8NG27 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.55
PJA1Q8NG27 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PJA1Q8NG27 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.7■■□□□ 1.54
PJA1Q8NG27 KRT18P10-201ENST00000388836 1287 ntBASIC24.7■■□□□ 1.54
PJA1Q8NG27 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PJA1Q8NG27 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.7■■□□□ 1.54
PJA1Q8NG27 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.7■■□□□ 1.54
PJA1Q8NG27 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PJA1Q8NG27 AC131281.2-201ENST00000520478 145 ntBASIC24.69■■□□□ 1.54
PJA1Q8NG27 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.69■■□□□ 1.54
PJA1Q8NG27 AC021242.3-201ENST00000607598 1377 ntBASIC24.68■■□□□ 1.54
PJA1Q8NG27 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.68■■□□□ 1.54
PJA1Q8NG27 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.68■■□□□ 1.54
PJA1Q8NG27 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.68■■□□□ 1.54
PJA1Q8NG27 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PJA1Q8NG27 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PJA1Q8NG27 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PJA1Q8NG27 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PJA1Q8NG27 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.67■■□□□ 1.54
PJA1Q8NG27 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PJA1Q8NG27 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PJA1Q8NG27 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.66■■□□□ 1.54
PJA1Q8NG27 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.66■■□□□ 1.54
PJA1Q8NG27 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.66■■□□□ 1.54
PJA1Q8NG27 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PJA1Q8NG27 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
PJA1Q8NG27 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.65■■□□□ 1.54
PJA1Q8NG27 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.65■■□□□ 1.54
PJA1Q8NG27 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
PJA1Q8NG27 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.65■■□□□ 1.54
PJA1Q8NG27 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms